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Computer-aided Drug Design and Virtual High Throughput Screening:
The process of innovative drug discovery and development is time-consuming
and expensive,
while the rate for success is low. Generally, only one of 10,000
compounds synthesized by chemists can reach the market. According
to recent survey on current drugs on the market, on average it costs
the pharmaceutical industry 300-500 million US dollars to bring
a new chemical entity molecule to the marketplace, and the process
from discovery to market usually takes 10-15 years.
Recently, Computer-Aided Drug Design (CADD) has become a new and
important method and tool in the field of innovative drug research
and development. Adding CADD, especially Computer-Aided Combi-chem
Design, into the circulation of innovative drugs research could
shorten the cycle and costs of research and development and enhance
the success rate of screening. LD adopts variety methods, including
parallel MD protein simulation method, structure-based parallel
docking program, ADME/T drug-like prediction methods and QSAR analysis
methods, to carry our computer-aided drug design. Therefore, the
compounds that LD provided are synthesizable and with high-rate
of success.
Virtual High Throughput screening takes advantage of supercomputer
or biology macromolecule 3D model to make screening of millions
or more compounds of the organic synthesis database with a view
of calculating and analyzing the combination level and selecting
high quality compounds for further screening and confirming. This
technique platform is mainly used in discovering of lead compound
of novel drug. Compared with traditional method, Virtual High Throughput
Screening greatly cuts the cost of labor, time and money, and improves
the efficiency and accuracy of screening. Especially, it could achieve
certain operation that traditional method couldn't do.
As soon as the activity of compounds we got by design is confirmed
in screening model, for further improvement in clinical practice
and avoiding or decreasing side effect, it is attachable to making
further structure enhancement and design. Through computer-aided
design and virtual screening, compound structure could be synthesized
in an ordinary way.
In
the 90's of 20th, super computer, with strong function on calculating,
played a key role in computational biology and drug design. Therefore,
both the speed and success rate of drug molecule design were enhanced
rapidly. Drug molecule design, as a practical tool, has involved
in all kinds of fields of drug research. Nowadays, several theory-based
drugs have successfully come to the market. All these show that
the research of drug molecule design more and more emphasizes the
capability of practicality. During the progress of medicine development
and research, the theory of molecule virtual, computer aided drug
design, and together with the theory of protein-ligand having effect
on each other have played a main role.
LD holds the most advanced equipments in the field of computer-aided
drug design and development, including one parallel 64-processor
SGI Origin 3800 Server, one 32-processor Alpha super-cluster, and
one parallel virtual drug-screening platform. It is also empowered
by virtual screening package, which include parallel MD protein
simulation method, structure-based parallelized docking program,
ADME/T drug-like prediction methods, and QSAR analysis methods.
LD has developed a technical team for the computer-aided drug discovery
and design.
Chemosynthesis
and Production Process Development
Biology Drug Screening
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